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The Farm Animal Genotype-Tissue Expression (FarmGTEx) Project
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Lingzhao Fang, Jinyan Teng, Qing Lin, Zhonghao Bai, Shuli Liu, Dailu Guan, Bingjie Li, Yahui Gao, Yali Hou, Mian Gong, Zhangyuan Pan, Ying Yu, Emily L Clark, Jacqueline Smith, Konrad Rawlik, Ruidong Xiang, Amanda J Chamberlain, Michael E Goddard, Mathew Littlejohn, Greger Larson, David E MacHugh, John F O'Grady, Peter Sørensen, Goutam Sahana, Mogens Sandø Lund, Zhihua Jiang, Xiangchun Pan, Wentao Gong, Haihan Zhang, Xi He, Yuebo Zhang, Ning Ga, Jun He, Guoqiang Yi, Yuwen Liu, Zhonglin Tang, Pengju Zhao, Yang Zhou, Liangliang Fu, Xiao Wang, Dan Hao, Lei Liu, Siqian Chen, Robert S Young, Xia Shen, Charley Xia, Hao Cheng, Li Ma, John B Cole, Ransom L Baldwin th, Cong-Jun Li, Curtis P Van Tassell, Benjamin D Rosen, Nayan Bhowmik, Joan Lunney, Wansheng Liu, Leluo Guan, Xin Zhao, Eveline M Ibeagha-Awemu, Yonglun Luo, Lin Lin, Oriol Canela-Xandri, Martijn F L Derks, Richard P M A Crooijmans, Marta Gòdia, Ole Madsen, Martien A M Groenen, James E Koltes, Christopher K Tuggle, Fiona M McCarthy, Dominique Rocha, Elisabetta Giuffra, Marcel Amills, Alex Clop, Maria Ballester, Gwenola Tosser-Klopp, Jing Li, Chao Fang, Ming Fang, Qishan Wang, Zhuocheng Hou, Qin Wang, Fuping Zhao, Lin Jiang, Guiping Zhao, Zhengkui Zhou, Rong Zhou, Hehe Liu, Juan Deng, Long Jin, Mingzhou Li, Delin Mo, Xiaohong Liu, Yaosheng Chen, Xiaolong Yuan, Jiaqi Li, Shuhong Zhao, Yi Zhang, Xiangdong Ding, Dongxiao Sun, Hui-Zeng Sun, Cong Li, Yu Wang, Yu Jiang, Dongdong Wu, Wenwen Wang, Xinzhong Fan, Qin Zhang, Kui Li, Hao Zhang, Ning Yang, Xiaoxiang Hu, Wen Huang, Jiuzhou Song, Yang Wu, Jian Yang, Weiwei Wu, Claudia Kasper, Xinfeng Liu, Xiaofei Yu, Leilei Cui, Xiang Zhou, Seyoung Kim, Wei Li, Hae Kyung Im, Edward S Buckler, Bing Ren, Michael C Schatz, Jingyi Jessica Li, Abraham A Palmer, Laurent Frantz, Huaijun Zhou, Zhe Zhang, George E Liu; FarmGTEx Consortium
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2025
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Nature Genetics
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Integrating large-scale Meta-GWAS and PigGTEx Resources to Decipher the Genetic Basis of 232 Complex Traits in Pigs
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Zhiting Xu, Qing Lin, Xiaodian Cai, Zhanming Zhong, Jinyan Teng, Bingjie Li, Haonan Zeng, Yahui Gao, Zexi Cai, Xiaoqing Wang, Liangyu Shi, Xue Wang, Yi Wang, Zipeng Zhang, Yu Lin, Shuli Liu, Hongwei Yin, Zhonghao Bai, Chen Wei, Jun Zhou, Wenjing Zhang, Xiaoke Zhang, Shaolei Shi, Jun Wu, Shuqi Diao, Yuqiang Liu, Xiangchun Pan, Xueyan Feng, Ruiqi Liu, Zhanqin Su, Chengjie Chang, Qianghui Zhu, Yuwei Wu, Zhongyin Zhou, Lijing Bai, Kui Li, Qishan Wang, Yuchun Pan, Zhong Xu, Xianwen Peng, Shuqi Mei, Delin Mo, Xiaohong Liu, Hao Zhang, Xiaolong Yuan, Yang Liu, George E Liu, Guosheng Su, Goutam Sahana, Mogens Sandø Lund, Li Ma, Ruidong Xiang, Xia Shen, Pinghua Li, Ruihua Huang, Maria Ballester, Daniel Crespo-Piazuelo, Marcel Amills, Alex Clop, Peter Karlskov-Mortensen, Merete Fredholm, Guoqing Tang, Mingzhou Li, Xuewei Li, Xiangdong Ding, Jiaqi Li, Yaosheng Chen, Qin Zhang, Yunxiang Zhao, Fuping Zhao, Lingzhao Fang, Zhe Zhang
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2025
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National Science Review
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Genetic Regulation of Gene Expression Across Multiple Tissues in Chickens
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Dailu Guan, Zhonghao Bai, Xiaoning Zhu, Conghao Zhong, Yali Hou, Di Zhu; ChickenGTEx Consortium; Houcheng Li, Fangren Lan, Shuqi Diao, Yuelin Yao, Bingru Zhao, Xiaochang Li, Zhangyuan Pan, Yahui Gao, Yuzhe Wang, Dong Zou, Ruizhen Wang, Tianyi Xu, Congjiao Sun, Hongwei Yin, Jinyan Teng, Zhiting Xu, Qing Lin, Shourong Shi, Dan Shao, Fabien Degalez, Sandrine Lagarrigue, Ying Wang, Mingshan Wang, Minsheng Peng, Dominique Rocha, Mathieu Charles, Jacqueline Smith, Kellie Watson, Albert Johannes Buitenhuis, Goutam Sahana, Mogens Sandø Lund, Wesley Warren, Laurent Frantz, Greger Larson, Susan J Lamont, Wei Si, Xin Zhao, Bingjie Li, Haihan Zhang, Chenglong Luo, Dingming Shu, Hao Qu, Wei Luo, Zhenhui Li, Qinghua Nie, Xiquan Zhang, Ruidong Xiang, Shuli Liu, Zhe Zhang, Zhang Zhang, George E Liu, Hans Cheng, Ning Yang, Xiaoxiang Hu, Huaijun Zhou, Lingzhao Fang
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2025
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Nature Genetics
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Tumor Cell-Derived N-Acetyl-Aspartyl-Glutamate Reshapes the Tumor Microenvironment to Facilitate Breast Cancer Metastasis
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Jie Xia, Lixing Zhang, Wucheng Zhu, Juchuanli Tu, Xilei Peng, Qiaodan Deng, Siqin Li, Xueyan He, Haonan Dong, Cuicui Liu, Xian Chen, Jiahui Xu, Wei Ma, Yi Xiao, Wen Liu, Guohong Hu, Yi-Zhou Jiang, Ceshi Chen, Xiu-Wu Bian, Zhi-Ming Shao, Suling Liu
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2025
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Science Bulletin
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A Neuronal Slit1-Dependent Program Rescues Oligodendrocyte Differentiation and Myelination under Chronic Hypoxic Conditions
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Wenxiu Dai, Ximing Nian, Zhihao Zhou, Ailian Du, Qi Liu, Shufang Jia, Yan Lu, Daopeng Li, Xiaoyun Lu, Yanqin Zhu, Qiuying Huang, Jiaquan Lu, Yunshan Xiao, Liangkai Zheng, Wanying Lei, Nengyin Sheng, Xiujuan Zang, Yanqiang Hou, Zilong Qiu, Ren Xu, Shuhua Xu, Xueqin Zhang, Liang Zhang
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2025
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Cell Reports
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A Microengineered 3D Human Neurovascular Unit Model to Probe the Neuropathogenesis of Herpes Simplex Encephalitis
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Min Zhang, Peng Wang, Yunsong Wu, Lin Jin, Jiayue Liu, Pengwei Deng, Rongcan Luo, Xiyue Chen, Mengqian Zhao, Xu Zhang, Yaqiong Guo, Ying Yan, Yingtong Di, Jianhua Qin
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2025
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Nature Communications
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Ancient Genomes Illuminate the Demographic History of Shandong over the Past two Millennia
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Qu Shen, Zhigang Wu, Jinguo Zan, Xiaomin Yang, Jianxin Guo, Zhi Ji, Baitong Wang, Yilan Liu, Xiaolu Mao, Xinyi Wang, Xinyue Zou, Hongming Zhou, Yanying Peng, Hao Ma, Haifeng He, Tianyou Bai, Mengting Xu, Shaoqing Wen, Li Jin, Qun Zhang, Chuan-Chao Wang
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2025
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Journal of Genetics and Genomics
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Genome Diversity and Signatures of Natural Selection in Mainland Southeast Asia
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Yaoxi He, Xiaoming Zhang, Min-Sheng Peng, Yu-Chun Li, Kai Liu, Yu Zhang, Leyan Mao, Yongbo Guo, Yujie Ma, Bin Zhou, Wangshan Zheng, Tian Yue, Yuwen Liao, Shen-Ao Liang, Lu Chen, Weijie Zhang, Xiaoning Chen, Bixia Tang, Xiaofei Yang, Kai Ye, Shenghan Gao, Yurun Lu, Yong Wang, Shijie Wan, Rushan Hao, Xuankai Wang, Yafei Mao, Shanshan Dai, Zongliang Gao, Li-Qin Yang, Jianxin Guo, Jiangguo Li, Chao Liu, Jianhua Wang, Tuot Sovannary, Long Bunnath, Jatupol Kampuansai, Angkhana Inta, Metawee Srikummool, Wibhu Kutanan, Huy Quang Ho, Khoa Dang Pham, Sommay Singthong, Somphad Sochampa, U Win Kyaing, Wittaya Pongamornkul, Chutima Morlaeku, Kittisak Rattanakrajangsri; Consortium of Anthropological Research in Southeast Asia and Southwest China (CASEAC); Qing-Peng Kong, Ya-Ping Zhang, Bing Su
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2025
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Nature
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Translational Regulation of SND1 Governs Endothelial Homeostasis During Stress
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Zhenbo Han, Gege Yan, Jordan Jousma, Sarath Babu Nukala, Mehdi Amiri, Stephen Kiniry, Negar Tabatabaei, Youjeong Kwon, Sen Zhang, Jalees Rehman, Sandra Pinho, Sang-Bing Ong, Pavel V Baranov, Soroush Tahmasebi, Sang-Ging Ong
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2025
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the Journal of Clinical Investigation
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Deciphering Enhancers of Hearing Loss Genes for Efficient and Targeted Gene Therapy of Hereditary Deafness
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Simeng Zhao, Qiuxiang Yang, Zehua Yu, Cenfeng Chu, Shengqi Dai, Hongli Li, Min Diao, Lingyue Feng, Junzi Ke, Yilin Xue, Qifang Zhou, Yan Liu, Hanhui Ma, Chao-Po Lin, Yong-Gang Yao, Guisheng Zhong
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2025
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Neuron
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Positive Feedback Regulation between KLF5 and XPO1 Promotes Cell Cycle Progression of Basal like Breast Cancer
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Yu Tang, Rui Liu, Jing Zhu, Qian He, Chenglong Pan, Zhongmei Zhou, Jian Sun, Fubing Li, Longlong Zhang, Yujie Shi, Jing Yao, Dewei Jiang, Ceshi Chen
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2025
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Advanced Science
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Histone Lactylation Antagonizes Senescence and Skeletal Muscle Aging by Modulating Aging-Related Pathways
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Fanju Meng, Jianuo He, Xuebin Zhang, Wencong Lyu, Ran Wei, Shiyi Wang, Zhehao Du, Haochen Wang, Jinlong Bi, Xueyang Hua, Chao Zhang, Yiting Guan, Guoliang Lyu, Xiao-Li Tian, Lijun Zhang, Wenbing Xie, Wei Tao
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2025
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Advanced Science
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Peripheral Nervous System Microglia-like Cells Regulate Neuronal Soma Size throughout Evolution
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Zhisheng Wu, Yiheng Wang, Wei-Wei Chen, Hua Sun, Xiaoyan Chen, Xiaobo Li, Zeshuai Wang, Weizheng Liang, Shuang-Yin Wang, Xuemei Luan, Yijiang Li, Shangjin Huang, Yuteng Liang, Jiaqi Zhang, Zhou-Feng Chen, Guanlin Wang, Yun Gao, Yanan Liu, Jun Wang, Zhen Liu, Peng Shi, Cirong Liu, Longbao Lv, Anli Hou, Chenglin Wu, Chen Yao, Zexuan Hong, Ji Dai, Zhonghua Lu, Fan Pan, Xin Chen, Helmut Kettenmann, Ido Amit, John R Speakman, Yun Chen, Florent Ginhoux, Rongfeng Cui, Tianwen Huang, Hanjie Li
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2025
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Cell
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Genome-Wide Silencer Screening Reveals Key Silencer Modulating Reprogramming Efficiency in Mouse Induced Pluripotent Stem Cells
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Xiusheng Zhu, Lei Huang, Guoli Li, Biao Deng, Xiaoxiao Wang, Hu Yang, Yuanyuan Zhang, Qiuhan Wen, Chao Wang, Jingshu Zhang, Yunxiang Zhao, Kui Li, Yuwen Liu
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2025
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Advanced Science
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Evolutionary Repeatability of Chromatin Accessibility in the Hippocampus Between Echolocating Bats and Soft-furred Tree Mice
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Luye Shi, Yuanshuo Ma, Qinyang Hua, Junjun Hao, Qin Zhang, Yaxin Ye, Lu Yang, Qi Liu, Peng Chen, Zhen Liu, Peng Shi
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2025
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Science China. Life Sciences.
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